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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015801067.1_cds_XP_016472687.1_6460
CDS Infomation

[gene=LOC107794686] [db_xref=GeneID:107794686] [protein=uncharacterized protein LOC107794686] [protein_id=XP_016472687.1] [location=complement(join(17596..18183,18985..18996,19549..19985,20264..20455,20945..21103,21231..21758,25597..25719,26187..26280))] [gbkey=CDS]
Sequence

ATGTCGTTTACTCTTGCTTTGGCCTTCTTGGCTAAGGCATTGGCAGTTACAAACTTGTCG
GCCATTTCCTCAAAAATTTCTATGGAGCGGGTTGTCATTCCTGGAGAGGGTTTGTTGAGG
ACGCTTACTAGCATGTCAGTCAGCCATACCTCGAGAAGTTTGTTTACAGCTGTGGGCGTC
CCTTCTACTGCGGATATGGAGGCCCCTTTTCCACTGGAGAACATAAATGAGGAGAAGAAG
TTGTGGAGATGCTTGCCTTTATACCGTGCATTACTCAGAGAAAACCAGAGTGCTTTTGGA
AAAGAAGCTAAAGCTCTCTCGAGATTTCCCCCAGATGTGACTATATGTAGGAAGGTAACA
AGAGCTGGGGATACTGGCCTTCACGTACTTGTTGGTGCTGGAAAGTGGTATGATTCTGTG
ATAAGTAAGCCGAAAAGTTATGCATTAGAAGGATTGGTTATTCGTAACAACAATGGTCAT
ACACCTCTTTGTGTGGCTGCAAAGGTTGGGAACATGGAGGCAGCCAAGAAGTTGCTGCAA
CTCGAAACGGAAATCCGGAGTGTGCGAGCGACTGACGACGATACTGTTGGGCGGTATCCG
ATCATAGAGGCTGCTAGATATGGCCATAAGGAGATGGTTTTACTTTTGATTGGGGATATG
GCCACAAAGATGGCAGACTCCCCACCAACTAAAGAATCAGCTGCTTCCACCTTTCTCCAT
CTGCTAGTAGTAGCCGAATTCTACGATGTGCTGCTAGCTCTGGTTCGACGTTTTCCTGGT
TTGGCCCGGGCAGAGTTTTATGGTGACAAGGGTGATGTATCGCTTCTGAGTTTGATGGCT
GAGACACCTTCTGCATTTCGGAGTGGGACTCAGCTCCCCTTTTGGCAGCGCTTACTTTAT
TCTGTCTCACAGGCAAACTTAGAAAGCAGGTTATCAGACATTGAAAAGTCCTTTGTTGCA
AATCAGCCCTCAGTCACAACACCCTCAATGGAATTGCCACAGCCCGCTAATGAGTTAACA
TGGGAGTGTTTCGTGAAGTATCCACACAATTGTGTCATCACAATTCAAATGTGGCTTGCT
AGGATGATTAATATAGCAGCAATATTCAAGCACATTAAGGATAAAAAGTTAATGCATAAA
GAGACTCTTGATATCGTGGAACGTCTTTGCAAGGAGCTTATGAAAGAGTATAACGCTAAG
AATATTGAGCCAGTACTCAGAAAGGCAGTACTGTTGGCAGCAAGTTCAGGAATTCCTGAA
ATCATAGAAGAAATTGAAGATTGCTACTCAGACGCAATTTGGTTTGTTAATTCTGAAAAT
CATAACTTATTTCACCTTGCAGTAATAAATCGTTATGAAAAGGTGTTTAACCTCATATAT
CAGTTAAGTTTGTATAATCATTTGGTAATAACTGATGAAGACACTTCAGGAAACAATATA
TTACATATGGCTGGAAAATTAGCACCTCTTAGCCGACTCAATCTTATCTCAGGTGCAGCT
TTGCAAATGCAGCGCGAACTTCAATGGTTCCAGGAAGTTGAGAAGGAAGTGGAAAAGTTT
GTTCATCCAACTTTGAGGACAAATAGAAACTCATATGGAAAAACACCAAAAATGGTGTTC
ACTGAGGAACACAAGGAATTGGTCAAAGAAGGAGAGAAATGGATGAAAGAAACTGCAAAT
TCATGCACATTTGTGGCAGCCTTAACAGCAACGGTAGGATTTGCAGCAGCCATCACTGTG
CCAGGAGGAAATCAAAGCAAAGGTTTCCCAATCTTCTCCAAAGAACCGGCTTTCACTGTT
TTTGCAGTTTCGGTTGCATTCTGTCTATTCTCTTCTGTTGCCTCTGTGCTAATGTTTTTG
TCTATCCTCACAGCGAGATATGCAGAAATGGATTTTCTTAGATCTCTTCCAAAACGATTA
ATTATAGGCCTCGGTACACTGTTTATTTCAATGACATCTCTGATGATAGCATTTGGTGCT
TCAATTTACCTCGTTTTCGGTCAGAAAAATGGGTTGATACTCATTCCAGTAATCCTCTTT
GAGTCCTTGCAATTTCGTCTTTTGCTGGATATATGTATGTCCACATATGGCCCAAGCATT
TTTCATAAACAGAGCTCACGTTTACTCTACTAG

Peptide Sequence

PEP ID

XP_016472687.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107794686 [Nicotiana tabacum]
Sequence

MSFTLALAFLAKALAVTNLSAISSKISMERVVIPGEGLLRTLTSMSVSHTSRSLFTAVGV
PSTADMEAPFPLENINEEKKLWRCLPLYRALLRENQSAFGKEAKALSRFPPDVTICRKVT
RAGDTGLHVLVGAGKWYDSVISKPKSYALEGLVIRNNNGHTPLCVAAKVGNMEAAKKLLQ
LETEIRSVRATDDDTVGRYPIIEAARYGHKEMVLLLIGDMATKMADSPPTKESAASTFLH
LLVVAEFYDVLLALVRRFPGLARAEFYGDKGDVSLLSLMAETPSAFRSGTQLPFWQRLLY
SVSQANLESRLSDIEKSFVANQPSVTTPSMELPQPANELTWECFVKYPHNCVITIQMWLA
RMINIAAIFKHIKDKKLMHKETLDIVERLCKELMKEYNAKNIEPVLRKAVLLAASSGIPE
IIEEIEDCYSDAIWFVNSENHNLFHLAVINRYEKVFNLIYQLSLYNHLVITDEDTSGNNI
LHMAGKLAPLSRLNLISGAALQMQRELQWFQEVEKEVEKFVHPTLRTNRNSYGKTPKMVF
TEEHKELVKEGEKWMKETANSCTFVAALTATVGFAAAITVPGGNQSKGFPIFSKEPAFTV
FAVSVAFCLFSSVASVLMFLSILTARYAEMDFLRSLPKRLIIGLGTLFISMTSLMIAFGA
SIYLVFGQKNGLILIPVILFESLQFRLLLDICMSTYGPSIFHKQSSRLLY

Transcript Sequence

Gene sequence data has not been registered.